Genie Examples

PedGenie Examples


Single Locus Example	This example analyses each marker as a single locus.
Single Locus GeneCountAllele Example	Similar to the Single Locus Example, but the allele frequency estimation method GeneCounter from GeneCountAlleles program is used.
Composite Genotype Example	This example examines the joint inheritance of two or more markers, without considering phase of the data.
Haplotype Example	This example examines the joint inheritance of two or more markers, using phased data.
CMH / Meta Analysis Examples	Example of CMH / meta test statistics for multiple studies.
QTDT Interface Example	This is a PedGenie - QTDT Interface example.

hapMC Examples


Composite Genotype Example	This example examines the joint inheritance of two or more markers, with GCHap phased data method.
Haplotype Example	This example examines the joint inheritance of two or more markers, with GCHap phased data method.

hapConstructor Example


hapConstructor Example	This example examine the contruction of haplotype analyses of a two loci using unphased data.

QTDT Example


QTDT Example	This example demonstrates Genie and QTDT Interface with phased data.

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