AbstractGraph
AbstractMappable
AbstractTable
ActiveCanvas
AffectionStatusLocus
AffectionStatusPhenotype
Allele
AlleleErrorPenetrance
AlleleSharing
AllelesToGenotype
AnnealMover
ApproxGCHap
ApproxGCHap
Arrow
AuxiliaryFunction
AuxiliaryModel
AuxiliaryVariable
AuxLinkFunction
AuxLocusFunction
AuxOneGenHalvesVariable
AuxOneGenVariable
AuxThreeGenVariable
BasicClique
BasicGeneticData
BasicInterval
BasicVariable
BufferedCanvas
CarefulNetwork
CartesianPoint
CheckErrors
CheckFormat
CheckParameters
CheckPedigree
CheckTriplets
Clique
cMorgansToTheta
ComponentMarker
Curve
DagMover
DataCalculator
DataHaplotypeSource
DecomposableSearch
Decomposition
DenseTable
DiploGUI
Diplotypes
DirectedNetwork
DistanceAnnealMover
DoubleValue
DownCodeAlleles
DynamicMap
DynamicMappableMap
Edge
EdgeConstraint
EditingCoordinator
EditingMouser
EqualityFunction
Error
ErrorPenetrance
ErrorPrior
ExtendedLMSampler
Family
FindErrorProbs
FixedRecombination
FrameQuitter
Function
GCHap
GCHap
GeneCountAlleles
GeneCounter
GeneDrop
GeneDropper
GeneDrops
GeneticDataSource
GeneticFunction
GeneticTrait
GeneticVariable
Genotype
Genotype
GenotypeModel
GenotypeOnlyDropSampler
GenotypePrior
GetPolymorphisms
GlobalMover
GMCheck
GoldenSection
Graph
GraphFunction
GraphicalModel
GraphMHScheme
HapFormatter
HapGraph
HaploGUI
Haplotypes
HaplotypeSource
HashOfHash
HetCutOff
Heterozygosities
HetLods
HGS
ImperfectHaplotypes
IndependentLocusSampler
Individual
Inheritance
InputFormatter
IntArray
Interval
IntervalLD
IntervalSearch
IntervalTree
IntervalTreeGraph
IntValue
Iterable
IteratorFunction
JointScheme
JunctionTree
LabelledBlob
Lattice
LDModel
LDSampler
LikelihoodCalculator
LimitedIntervalSearch
Line
LinkageDataSet
LinkageException
LinkageFormatter
LinkageIndividual
LinkageInterface
LinkageLocus
LinkageParameterData
LinkagePedigreeData
LinkagePhenotype
LinkageSampler
LinkageToFastPhase
LinkageToPhase
LinkageVariables
LinkConstants
LinkedLocusSampler
LocalizedDecomposableSearch
LocalMover
LociVariables
Locus
Locus
LocusMeiosisSampler
LocusVariables
LogLikelihood
Main
MakeProbands
Map
MapAsCollection
MapCoordinator
MapEditor
MapMouser
MapMover
Mappable
MappableGraph
MapViewer
Marker
MarkerObservation
MarkerPhenotype
Marriage
MarriageNodeMap
MaskedNetwork
MaternalInheritance
MaxLoder
MaxTwoPointLods
McLink
McLinkLD
MendelianTransmission
MonogamyConstraint
MouseKey
Mouser
MovingMouser
MultiLocus
MultiLocusObservation
MultiLocusPhenotype
MultiLocusTrait
MutableGraph
Network
NewerDagMover
NewerLocalMover
NumberedAlleleLocus
NumberedAllelePhenotype
ObligateErrors
ObligatoryErrors
Observation
Observation
OneParentalMarriageConstraint
OnePoints
OneTheta
OutputFileListener
PageType
Paintable
Pair
ParameterData
PaternalInheritance
Pedigree
PedigreeData
PedNode
Penetrance
PerfectHaplotypes
Phenotype
PrintActiveCanvas
PrintingApplet
Product
QuantitativeLocus
QuantitativePhenotype
RadixPlaneSorter
RandomBag
RandomBipartiteTree
RandomPedTree
Recombination
SafeRunnable
SafeThread
ScrollWidget
SelectKindreds
SelectLoci
SelectPedigrees
SGS
SimHGS
SimSGS
SNP
Sorter
SparseTable
StaticMap
StringFormatter
Table
TableMaker
Theta
TiedIntervalSearch
Tlods
TransposedPerfectHaplotypes
TrimPed
Triplet
TripletClique
TrivialFunction
TwoParentConstraint
TwoPointLods
UnconditionalMeiosisSampler
UnorderedGenotype
UnorderedPrior
UnorderedTransmission
Variable
VariableRecombination
VerySparseTable
ViewGraph
ViewingApplet
ViewLinkPed
ViewPed
WindowingScheme
XYPair
ZeroLoopPed
ZeroLoopPedGenerator
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