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| Class Summary | |
|---|---|
| Allele | |
| AlleleErrorPenetrance | |
| AuxiliaryFunction | |
| AuxiliaryModel | |
| AuxiliaryVariable | |
| AuxLinkFunction | |
| AuxLocusFunction | |
| AuxOneGenHalvesVariable | |
| AuxOneGenVariable | |
| AuxThreeGenVariable | |
| Error | |
| ErrorPenetrance | |
| ErrorPrior | |
| ExtendedLMSampler | |
| FixedRecombination | |
| GeneticFunction | |
| GeneticVariable | |
| Genotype | A variable representing the ordered genotype for an individual as some genetic locus. |
| GenotypeModel | |
| GenotypeOnlyDropSampler | |
| GenotypePrior | A function that returns the prior probability of the genotype as the product of the priors for the paternal and maternal alleles. |
| IndependentLocusSampler | |
| Inheritance | |
| LinkageSampler | |
| LinkageVariables | |
| LinkedLocusSampler | |
| LociVariables | |
| LocusMeiosisSampler | |
| LocusVariables | |
| MaternalInheritance | |
| MaxLoder | |
| MendelianTransmission | |
| OneTheta | |
| PaternalInheritance | |
| Penetrance | |
| Recombination | |
| Theta | |
| Tlods | |
| TripletClique | |
| TrivialFunction | |
| UnconditionalMeiosisSampler | |
| UnorderedGenotype | |
| UnorderedPrior | |
| UnorderedTransmission | |
| VariableRecombination | |
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