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| Interface Summary | |
|---|---|
| LinkConstants | |
| Class Summary | |
|---|---|
| AffectionStatusLocus | This class represents a locus as specified in the linkage affectation status format. |
| AffectionStatusPhenotype | This represents the data for an individual at a locus specified in the linkage affected status format. |
| LinkageDataSet | This class holds the information from a standard Linkage parameter data file and a standard Linkage pedigree file. |
| LinkageFormatter | |
| LinkageIndividual | A class that contains the information for an individual from the linkage .ped file. |
| LinkageInterface | |
| LinkageLocus | This is the base class from which the linkage locus types are derived. |
| LinkageParameterData | This structure hold the information associated with the data from a linkage parameter file. |
| LinkagePedigreeData | A structure representing the data from a linkage .ped file. |
| LinkagePhenotype | This is a base class from with the linkage phenotype classes are derived. |
| NumberedAlleleLocus | This class represents the a locus given in the linkage numbered locus format. |
| NumberedAllelePhenotype | This class represents the data for an individual for a locus in the linkage numbered allele input format. |
| QuantitativeLocus | |
| QuantitativePhenotype | |
| Exception Summary | |
|---|---|
| LinkageException | A run time exception thrown by objects in the linkage package. |
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