4 0 0 5 << n loci, risk locus, sexlinked, program code.
0 0.0 0.0 0 << mutation locus, mutation rates male, female, haplotype something
1 2 3 4 << Marker Order
3 4 SNP1
.25 0.25 0.25 0.25
3 4 snP2
.25 0.25 0.25 0.25
3 4 SNP3
.25 0.25 0.25 0.25
3 4 SNP4
.25 0.25 0.25 0.25
0 0 << sexdifference, interference
0.1 0.1 0.1 << Spurious genetic distances.
1 5 0.2 0.1 << Who knows what this is.